Visualization of complexes of Hoechst 33258 and DNA duplexes in solution by atomic force microscopy

Tertiary structure changes in DNA duplexes, induced by Hoechst 33258 binding, have been examined by the use of atomic force microscopy. Besides minor groove binding, which is an established mode of binding for this drug, Hoechst 33258 has now been found to show another binding mode, which causes an unwinding of the duplex. When the drug concentration is as high as 0.5 microg/ml, the Hoechst 33258 molecule seems to function as a clamp for two DNA chains and forms a condensate. The condensate was found to have a toroidal shape. By surveying more than 100 microscopic images of such condensates formed in I microg/ml drug solution, a mechanism of toroidal condensate formation has been proposed.     

Influence of intramolecular vibrations in charge redistribution at the pentacene-graphite interface

We have investigated the relation between the intramolecular vibrational modes of pentacene and the charge redistribution at the pentacene-graphite interface by using high-resolution electron-energy-loss-spectroscopy. The three main vibrational peaks shift to lower energies as the pentacene film thickness decreases. In order to discuss this energy shift, we have calculated the vibrational energies of a free pentacene molecule by changing its charge state. We have also calculated the vibrational energies of a pentacene molecule adsorbed on a graphite sheet by changing the pentacene-graphite distance. Taking the experimental and calculation results into account, we conclude that the observed energy shifts result from an intramolecular charge redistribution. The present results indicate that the effect of an intramolecular charge redistribution is essential to discuss the origin of an energy shift observed in a vibrational study of an organic molecule/substrate interface.     

Grafting of methyl methacrylate and its derivatives onto blood

The grafting of vinyl monomers by tri-n-butylborane to blood has been investigated. The infrared spectra indicated that the monomers were grafted onto blood components. The grafting seems to occur onto blood proteins, mainly onto hemoglobin. The presence of water was essential to the grafting. The hydrolysis of the graft suggests that basic amino acids in the blood proteins, such as lysine and histidine, play an important role in the grafting.     

Sequence-specifically platinum metal deposition on enzymatically synthesized DNA block copolymer

Platinum metal was sequence-specifically deposited on the DNA block copolymer synthesized by the Klenow fragment of E. coli DNA polymerase I (3'-5' exonuclease deficient).     

Sequence-specific control of azobenzene assemblies by molecular recognition of DNA

We investigated the molecular recognition between the amphiphile AzoAde, which is composed of azobenzene in the hydrophobic and adenine in the hydrophilic portion of the molecule, and oligonucleotides having a homogeneous base (dA30, dT30, dG30, and dC30) at the air-water interface. On the basis of the complementary base-pairing of DNA in the duplex, orderly arrangement of AzoAde on templated dT30 was examined using pi-A isotherm, UV-vis RAS, FT-IR RAS, and XPS measurements. Although there was little interaction between AzoAde and mismatched oligonucleotides (dA30, dG30, and dC30), AzoAde prepared on a dT30 subphase stoichiometrically assembled and interacted with dT30, subsequently forming a J-form assembly at the air-water interface. AFM observation of the LB films revealed the nanostructure of the J-formed AzoAde monolayer on the dT30 subphase as well as the domain structures of the H-formed monolayers on the other oligonucleotide subphases. Therefore, dT30 has a potential application as a template for assembling AzoAde at the air-water interface.     

Polymeric catechol derivatives. IV. Polymerization behavior of 4-vinylcatechols and some properties of their polymeric derivatives

The polymerization and copolymerization of 4-vinylcatechols, such as 2-(0-methyl)-4-vinylcatechol (I), 3,4-dimethoxystyrene (II), and 3,4-methylenedioxystyrene (III), were investigated in cyclohexanone at 30°C, using tri-n-butylborane as an initiator. The reactions yielded vinyl polymers and copolymers. The copolymerization parameters of I–III were determined; their Q and e values were found to be similar to those of styrene and vinylhydroquinone. The copolymerization of I–III gave copolymers of a highly alternating character. The thermal stability of the polymers and copolymers so obtained was also studied. The redox potentials of hydroloyzed poly(I) were examined; the reverse “polymer effect” was observed.     

Precise retinal shape measurement by alignment error and eye model calibration

Optical Review - To evaluate the repeatability of the optical coherence tomography (OCT) retinal shape measurement with and without alignment correction in children and adults. 62 eyes of the 31...     

Preparation of Self-Organized Porous Polymer Masks for Si Dry Etching

Summary: Self-organized honeycomb-patterned polymer films were prepared by using condensed water droplet arrays as templates. Porous polymer masks for dry etching were easily prepared on Si substrates by peeling off the honeycomb-patterned films. After dry etching, hexagonally-arranged micro-pores were formed on the surface of Si substrates.     

Vinylhydroquinone. IV. Preparation and polymerization behavior of 2-methyl-5-vinylhydroquinone derivatives

As in the case of vinylhydroquinone (I), its alkyl-substituted derivative, 2-methyl-5-vinylhydroquinone (II) was found to copolymerize with methyl methacrylate by tri-n-butylborane in cyclohexanone at 30°C. II was prepared from the O,O′-bisether compound, 2-methyl-5-vinyl-O,O′-bis(1′-ethoxyethyl)hydroquinone (III). The monomer reactivity ratios (M₂ = II) were determined to be r₁ = 0.37 and r₂ = 0. No homopolymerization proceeded under the same conditions. Ordinary free-radical initiators, such as azobisisobutyronitrile and benzoyl peroxide, were not effective in the homopolymerization of II. 1:1 Copolymers were obtained from II and maleic anhydride by using tri-n-butylborane as an initiator. The copolymers exhibited no definite melting range and decomposed at 370–375°C endothermally (DSC). The polymerization behavior of III was also investigated. Although tri-n-butylborane did not initiate the homopolymerization of the monomer, azobisisobutyronitrile was capable of initiating the homopolymerization and copolymerization of III. The monomer reactivity ratios (M₁ = styrene) were determined to be r₁ = 0.83 and r₂ = 0.18. The ratios gave the following Q and e values; Q = 0.15 and e = ?2.2.     

Measurement of Wavelength Dependence of Electro-Optic Coefficients r22 of Non-doped and 5% MgO-doped Congruent LiNbO3 Crystals and 1.8% MgO-doped Quasi-stoichiometric LiNbO3 Crystal by Multiple Reflection Interference Method

The electro-optic coefficient r ₂₂ in the wavelength range from 409 to 1580 nm was measured for non-doped and 5% MgO-doped congruent LiNbO₃ crystals and 1.8% MgO-doped quasi-stoichiometric LiNbO₃ crystals in a simple optical system using a multiple reflection interference method capable of producing high-precision results without the application of antireflection film to the end faces of the crystal. The influence of the manufacturing errors of the electrooptic crystals was discussed on the measurement of the r ₂₂ coefficient. The experimental errors are less than approximately 0.5% in the wavelength range from 409 to 1064 nm and approximately 1% from 1340 to 1580 nm. It was further shown that polarizing of the laser along X axis resulted in highly accurate measurement of the r ₂₂ of LiNbO₃ crystals.